Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Smarce1O54941 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Smarce1O54941 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.02■□□□□ 0.32
Smarce1O54941 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Gm42769-201ENSMUST00000198576 1659 ntBASIC17.02■□□□□ 0.32
Smarce1O54941 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.02■□□□□ 0.32
Smarce1O54941 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Gm10275-202ENSMUST00000168697 495 ntBASIC17.02■□□□□ 0.32
Smarce1O54941 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.02■□□□□ 0.32
Smarce1O54941 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Smarce1O54941 Gm10275-201ENSMUST00000092620 635 ntBASIC17.02■□□□□ 0.32
Smarce1O54941 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarce1O54941 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Smarce1O54941 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarce1O54941 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Smarce1O54941 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.02■□□□□ 0.31
Smarce1O54941 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarce1O54941 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Smarce1O54941 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarce1O54941 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.02■□□□□ 0.31
Smarce1O54941 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.01■□□□□ 0.31
Smarce1O54941 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
Smarce1O54941 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarce1O54941 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Smarce1O54941 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17■□□□□ 0.31
Smarce1O54941 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17■□□□□ 0.31
Smarce1O54941 AC154222.1-201ENSMUST00000223882 475 ntBASIC17■□□□□ 0.31
Smarce1O54941 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Gm38577-201ENSMUST00000221531 4545 ntBASIC17■□□□□ 0.31
Smarce1O54941 Gm38391-201ENSMUST00000191720 4069 ntBASIC17■□□□□ 0.31
Smarce1O54941 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Smarce1O54941 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarce1O54941 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Smarce1O54941 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarce1O54941 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarce1O54941 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Smarce1O54941 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smarce1O54941 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarce1O54941 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.99■□□□□ 0.31
Smarce1O54941 Gm14140-201ENSMUST00000119999 995 ntBASIC16.99■□□□□ 0.31
Smarce1O54941 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarce1O54941 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarce1O54941 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.99■□□□□ 0.31
Smarce1O54941 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarce1O54941 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.99■□□□□ 0.31
Smarce1O54941 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarce1O54941 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarce1O54941 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Smarce1O54941 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarce1O54941 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarce1O54941 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarce1O54941 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smarce1O54941 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarce1O54941 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarce1O54941 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.99■□□□□ 0.31
Smarce1O54941 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smarce1O54941 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Smarce1O54941 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.98■□□□□ 0.31
Smarce1O54941 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms