Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.74□□□□□ -0.37
Sh2b3O09039 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh2b3O09039 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Gm5866-201ENSMUST00000177881 973 ntBASIC12.74□□□□□ -0.37
Sh2b3O09039 Gm27306-201ENSMUST00000183970 107 ntBASIC12.74□□□□□ -0.37
Sh2b3O09039 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.74□□□□□ -0.37
Sh2b3O09039 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.74□□□□□ -0.37
Sh2b3O09039 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.74□□□□□ -0.37
Sh2b3O09039 Gm6888-201ENSMUST00000221983 706 ntBASIC12.74□□□□□ -0.37
Sh2b3O09039 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Sh2b3O09039 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Sh2b3O09039 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.74□□□□□ -0.37
Sh2b3O09039 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2b3O09039 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sh2b3O09039 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Gm25144-201ENSMUST00000179561 110 ntBASIC12.73□□□□□ -0.37
Sh2b3O09039 Gm25352-201ENSMUST00000179815 110 ntBASIC12.73□□□□□ -0.37
Sh2b3O09039 Gm38294-201ENSMUST00000192831 381 ntBASIC12.73□□□□□ -0.37
Sh2b3O09039 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.73□□□□□ -0.37
Sh2b3O09039 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.73□□□□□ -0.37
Sh2b3O09039 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2b3O09039 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sh2b3O09039 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms