Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb9E9Q5G2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb9E9Q5G2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb9E9Q5G2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Syt7-204ENSMUST00000223586 1344 ntBASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Gm12585-201ENSMUST00000117307 290 ntBASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Gm15321-201ENSMUST00000121290 288 ntBASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb9E9Q5G2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms