Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Gm3890-201ENSMUST00000182416 207 ntBASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Gm37922-201ENSMUST00000195596 455 ntBASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a3E9PWQ3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Mir3060-201ENSMUST00000175339 83 ntBASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Gm30285-201ENSMUST00000214614 422 ntBASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Gm10179-201ENSMUST00000086233 688 ntBASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Arhgef33-210ENSMUST00000225548 456 ntBASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Spcs1-203ENSMUST00000226374 592 ntBASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a3E9PWQ3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a3E9PWQ3 Gm7541-201ENSMUST00000118361 535 ntBASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms