Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Gm29608-201ENSMUST00000190444 463 ntBASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Gm29741-201ENSMUST00000192667 421 ntBASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Olfr284-202ENSMUST00000206647 966 ntBASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 CT030704.2-201ENSMUST00000228887 494 ntBASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Carlr-201ENSMUST00000181515 2574 ntBASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Gm29199-201ENSMUST00000187766 775 ntBASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Gm38341-201ENSMUST00000195357 515 ntBASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Itm2b-204ENSMUST00000228637 783 ntBASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Gm4081-201ENSMUST00000195287 1838 ntBASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hfm1D3Z4R1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Gm15808-201ENSMUST00000119046 604 ntBASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hfm1D3Z4R1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Gm8706-201ENSMUST00000197372 1491 ntBASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Mir698-201ENSMUST00000102164 109 ntBASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Gm7029-201ENSMUST00000173226 450 ntBASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Mir3547-201ENSMUST00000175461 88 ntBASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Gm5850-201ENSMUST00000192923 1206 ntBASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Gm37466-201ENSMUST00000195692 652 ntBASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hfm1D3Z4R1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hfm1D3Z4R1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hfm1D3Z4R1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC19.72■□□□□ 0.75
Hfm1D3Z4R1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hfm1D3Z4R1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hfm1D3Z4R1 Gm42627-201ENSMUST00000197347 224 ntBASIC19.72■□□□□ 0.75
Hfm1D3Z4R1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC19.72■□□□□ 0.75
Hfm1D3Z4R1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hfm1D3Z4R1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hfm1D3Z4R1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Hfm1D3Z4R1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hfm1D3Z4R1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms