Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.44□□□□□ -0.1
Col4a6B1AVK5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a6B1AVK5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Mir698-201ENSMUST00000102164 109 ntBASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Gm13350-201ENSMUST00000120519 479 ntBASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Gm1335-201ENSMUST00000121653 386 ntBASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Gm26927-201ENSMUST00000182385 965 ntBASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Gm27516-201ENSMUST00000184237 98 ntBASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Gm15236-201ENSMUST00000117309 379 ntBASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a6B1AVK5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gm7584-201ENSMUST00000175829 940 ntBASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gm37259-201ENSMUST00000193903 849 ntBASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gm42550-201ENSMUST00000201553 960 ntBASIC14.41□□□□□ -0.1
Col4a6B1AVK5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.41□□□□□ -0.1
Col4a6B1AVK5 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms