Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-1A0N8R1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-1A0N8R1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Mir5131-201ENSMUST00000175426 93 ntBASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Gm27301-201ENSMUST00000184012 127 ntBASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-1A0N8R1 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav12-1A0N8R1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Gm12350-201ENSMUST00000121208 462 ntBASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-1A0N8R1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-1A0N8R1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms