Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Gm2451-201ENSMUST00000199447 999 ntBASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Gm10290-201ENSMUST00000200451 999 ntBASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Gm44492-201ENSMUST00000197012 141 ntBASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Gm44771-201ENSMUST00000206975 626 ntBASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv4-53A0A0G2JFC6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms