Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm7222-201ENSMUST00000117512 906 ntBASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm45747-201ENSMUST00000212203 999 ntBASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-5A0A075B6B9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6d-5A0A075B6B9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms