Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav6n-6A0A075B6B2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav6n-6A0A075B6B2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Trav6n-6A0A075B6B2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav6n-6A0A075B6B2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav6n-6A0A075B6B2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav6n-6A0A075B6B2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav6n-6A0A075B6B2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav6n-6A0A075B6B2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav6n-6A0A075B6B2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav6n-6A0A075B6B2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav6n-6A0A075B6B2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
Trav6n-6A0A075B6B2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.7
Trav6n-6A0A075B6B2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav6n-6A0A075B6B2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Trav6n-6A0A075B6B2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Trav6n-6A0A075B6B2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav6n-6A0A075B6B2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm18489-201ENSMUST00000172565 551 ntBASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm2651-201ENSMUST00000203560 838 ntBASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav6n-6A0A075B6B2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms