Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.74□□□□□ -0.53
Trav18A0A075B656 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Gm9385-201ENSMUST00000117563 472 ntBASIC11.74□□□□□ -0.53
Trav18A0A075B656 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.74□□□□□ -0.53
Trav18A0A075B656 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.73□□□□□ -0.53
Trav18A0A075B656 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.73□□□□□ -0.53
Trav18A0A075B656 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Rubie-203ENSMUST00000227803 2430 ntBASIC11.73□□□□□ -0.53
Trav18A0A075B656 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav18A0A075B656 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav18A0A075B656 Gm14140-201ENSMUST00000119999 995 ntBASIC11.72□□□□□ -0.53
Trav18A0A075B656 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms