Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm27622-201ENSMUST00000183779 60 ntBASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Mrpl40Q9Z2Q5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm25287-201ENSMUST00000103846 110 ntBASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm22918-201ENSMUST00000103855 110 ntBASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm15483-201ENSMUST00000120338 456 ntBASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl40Q9Z2Q5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm38225-201ENSMUST00000194001 393 ntBASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms