Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn9Q9Z0S7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Gm2810-201ENSMUST00000118681 990 ntBASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Gm43514-201ENSMUST00000198852 424 ntBASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.79□□□□□ -0.2
Cldn9Q9Z0S7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Rprl2-201ENSMUST00000157150 290 ntBASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Gm38225-201ENSMUST00000194001 393 ntBASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn9Q9Z0S7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cldn9Q9Z0S7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cldn9Q9Z0S7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn9Q9Z0S7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms