Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Gm14822-201ENSMUST00000122247 291 ntBASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Gm24513-201ENSMUST00000174964 138 ntBASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Gm27397-201ENSMUST00000184997 107 ntBASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Gm18057-201ENSMUST00000208220 503 ntBASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Gm9182-201ENSMUST00000217829 639 ntBASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.22□□□□□ -0.29
ClcnkaQ9WUB7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Mir1895-201ENSMUST00000122615 79 ntBASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Rprl2-201ENSMUST00000157150 290 ntBASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ClcnkaQ9WUB7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
ClcnkaQ9WUB7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ClcnkaQ9WUB7 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms