Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Gm12203-201ENSMUST00000118235 598 ntBASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Gm12209-201ENSMUST00000120089 596 ntBASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Gm8810-201ENSMUST00000172895 754 ntBASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Gm4271-201ENSMUST00000174444 973 ntBASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1fQ9JIS7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Gm8213-201ENSMUST00000118191 441 ntBASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Gm42693-201ENSMUST00000196779 631 ntBASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1fQ9JIS7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.02■□□□□ 0.16
Cacna1fQ9JIS7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm15198-201ENSMUST00000117283 177 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm12403-201ENSMUST00000121384 959 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1fQ9JIS7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1fQ9JIS7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1fQ9JIS7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1fQ9JIS7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1fQ9JIS7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1fQ9JIS7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cacna1fQ9JIS7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1fQ9JIS7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.01■□□□□ 0.15
Cacna1fQ9JIS7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1fQ9JIS7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms