Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.99■□□□□ 0.31
Ube3bQ9ES34 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3bQ9ES34 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Gm22189-201ENSMUST00000103822 86 ntBASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Gm7488-201ENSMUST00000117148 684 ntBASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Gm10766-202ENSMUST00000194123 606 ntBASIC16.98■□□□□ 0.31
Ube3bQ9ES34 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.98■□□□□ 0.31
Ube3bQ9ES34 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Gm37714-201ENSMUST00000194742 342 ntBASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Syt7-205ENSMUST00000224135 1557 ntBASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube3bQ9ES34 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Gm4804-201ENSMUST00000182234 999 ntBASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube3bQ9ES34 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms