Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Gm13350-201ENSMUST00000120519 479 ntBASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Gm37466-201ENSMUST00000195692 652 ntBASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-4Q9EQM3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Gm13612-201ENSMUST00000119276 390 ntBASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Gm16570-201ENSMUST00000161951 436 ntBASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Mir8109-201ENSMUST00000184375 117 ntBASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-4Q9EQM3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Gm22331-201ENSMUST00000158066 136 ntBASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Gm27516-201ENSMUST00000184237 98 ntBASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Gm4857-201ENSMUST00000192718 785 ntBASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Gm3961-201ENSMUST00000204425 994 ntBASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Gm6983-201ENSMUST00000214912 628 ntBASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx2-4Q9EQM3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms