Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnft1Q9DCN7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Gm37230-201ENSMUST00000194491 818 ntBASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnft1Q9DCN7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Gm13597-201ENSMUST00000121239 375 ntBASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Gm45098-201ENSMUST00000207179 657 ntBASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnft1Q9DCN7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnft1Q9DCN7 Matn2-206ENSMUST00000228570 2798 ntBASIC14□□□□□ -0.17
Rnft1Q9DCN7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnft1Q9DCN7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnft1Q9DCN7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnft1Q9DCN7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnft1Q9DCN7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms