Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1aQ9D132 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1aQ9D132 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1aQ9D132 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1aQ9D132 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.59□□□□□ -0.23
Upk1aQ9D132 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1aQ9D132 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1aQ9D132 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1aQ9D132 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.59□□□□□ -0.23
Upk1aQ9D132 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1aQ9D132 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1aQ9D132 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1aQ9D132 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Upk1aQ9D132 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1aQ9D132 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Upk1aQ9D132 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk1aQ9D132 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Upk1aQ9D132 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk1aQ9D132 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk1aQ9D132 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk1aQ9D132 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.58□□□□□ -0.24
Upk1aQ9D132 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.58□□□□□ -0.24
Upk1aQ9D132 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.58□□□□□ -0.24
Upk1aQ9D132 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.58□□□□□ -0.24
Upk1aQ9D132 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.58□□□□□ -0.24
Upk1aQ9D132 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.58□□□□□ -0.24
Upk1aQ9D132 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1aQ9D132 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Gm13036-201ENSMUST00000117799 748 ntBASIC13.57□□□□□ -0.24
Upk1aQ9D132 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.57□□□□□ -0.24
Upk1aQ9D132 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1aQ9D132 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
Upk1aQ9D132 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.56□□□□□ -0.24
Upk1aQ9D132 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Upk1aQ9D132 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.56□□□□□ -0.24
Upk1aQ9D132 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Upk1aQ9D132 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms