Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Gm13036-201ENSMUST00000117799 748 ntBASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ska1Q9CPV1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Gm4899-201ENSMUST00000178708 719 ntBASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Gm9726-201ENSMUST00000180321 678 ntBASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ska1Q9CPV1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.53□□□□□ -0.24
Ska1Q9CPV1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ska1Q9CPV1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ska1Q9CPV1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ska1Q9CPV1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ska1Q9CPV1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms