Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm44771-201ENSMUST00000206975 626 ntBASIC16.34■□□□□ 0.21
Trim11Q99PQ2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.34■□□□□ 0.21
Trim11Q99PQ2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim11Q99PQ2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.33■□□□□ 0.21
Trim11Q99PQ2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.33■□□□□ 0.21
Trim11Q99PQ2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim11Q99PQ2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.33■□□□□ 0.21
Trim11Q99PQ2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.21
Trim11Q99PQ2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim11Q99PQ2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Trim11Q99PQ2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim11Q99PQ2 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Gm45612-201ENSMUST00000211320 160 ntBASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Gm10175-201ENSMUST00000086013 645 ntBASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim11Q99PQ2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim11Q99PQ2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Gm18057-201ENSMUST00000208220 503 ntBASIC16.31■□□□□ 0.2
Trim11Q99PQ2 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.31■□□□□ 0.2
Trim11Q99PQ2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms