Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.58□□□□□ -0.4
Scrt1Q99M85 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Gm13829-201ENSMUST00000119600 138 ntBASIC12.58□□□□□ -0.4
Scrt1Q99M85 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Gm20445-201ENSMUST00000061905 565 ntBASIC12.58□□□□□ -0.4
Scrt1Q99M85 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.58□□□□□ -0.4
Scrt1Q99M85 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.58□□□□□ -0.4
Scrt1Q99M85 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Gm5566-201ENSMUST00000116118 459 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Gm18018-201ENSMUST00000198273 408 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Gm43703-201ENSMUST00000200523 763 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Gm18062-201ENSMUST00000208020 547 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Gm6007-201ENSMUST00000208170 823 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Gm18055-201ENSMUST00000208254 547 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Gm46209-201ENSMUST00000217912 553 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.57□□□□□ -0.4
Scrt1Q99M85 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scrt1Q99M85 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.56□□□□□ -0.4
Scrt1Q99M85 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.56□□□□□ -0.4
Scrt1Q99M85 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms