Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Mir125a-201ENSMUST00000083545 68 ntBASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Lysmd3Q99LE3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Gm15653-201ENSMUST00000119247 907 ntBASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Mir7684-201ENSMUST00000183858 60 ntBASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Gm27321-201ENSMUST00000185021 205 ntBASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 AA619741-201ENSMUST00000195095 646 ntBASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd3Q99LE3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd3Q99LE3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms