Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.54■□□□□ 0.24
Smc1bQ920F6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.54■□□□□ 0.24
Smc1bQ920F6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.54■□□□□ 0.24
Smc1bQ920F6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.54■□□□□ 0.24
Smc1bQ920F6 Gm18062-201ENSMUST00000208020 547 ntBASIC16.54■□□□□ 0.24
Smc1bQ920F6 Gm18055-201ENSMUST00000208254 547 ntBASIC16.54■□□□□ 0.24
Smc1bQ920F6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.54■□□□□ 0.24
Smc1bQ920F6 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.54■□□□□ 0.24
Smc1bQ920F6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc1bQ920F6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.53■□□□□ 0.24
Smc1bQ920F6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.53■□□□□ 0.24
Smc1bQ920F6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smc1bQ920F6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Gm29667-201ENSMUST00000190817 490 ntBASIC16.53■□□□□ 0.24
Smc1bQ920F6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1bQ920F6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.53■□□□□ 0.24
Smc1bQ920F6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.52■□□□□ 0.24
Smc1bQ920F6 Gm12134-201ENSMUST00000122109 520 ntBASIC16.52■□□□□ 0.24
Smc1bQ920F6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1bQ920F6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1bQ920F6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1bQ920F6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Smc1bQ920F6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1bQ920F6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1bQ920F6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1bQ920F6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1bQ920F6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms