Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Gm9385-201ENSMUST00000117563 472 ntBASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Gm17968-201ENSMUST00000194902 784 ntBASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Gm2451-201ENSMUST00000199447 999 ntBASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Gm10290-201ENSMUST00000200451 999 ntBASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb4Q91XZ6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Gm45747-201ENSMUST00000212203 999 ntBASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Gm5364-201ENSMUST00000216789 889 ntBASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb4Q91XZ6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms