Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
H1fooQ8VIK3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H1fooQ8VIK3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H1fooQ8VIK3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
H1fooQ8VIK3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H1fooQ8VIK3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H1fooQ8VIK3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H1fooQ8VIK3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H1fooQ8VIK3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H1fooQ8VIK3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
H1fooQ8VIK3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.02□□□□□ -0.49
H1fooQ8VIK3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.02□□□□□ -0.49
H1fooQ8VIK3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.02□□□□□ -0.49
H1fooQ8VIK3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
H1fooQ8VIK3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Gm37230-201ENSMUST00000194491 818 ntBASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Gm44771-201ENSMUST00000206975 626 ntBASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
H1fooQ8VIK3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms