Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 BC001981-202ENSMUST00000191393 1545 ntBASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Gm14701-201ENSMUST00000117156 348 ntBASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Gm27631-201ENSMUST00000184163 466 ntBASIC15.74■□□□□ 0.11
Rpap2Q8VC34 AA619741-201ENSMUST00000195095 646 ntBASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpap2Q8VC34 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Gm9719-201ENSMUST00000162765 543 ntBASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpap2Q8VC34 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Gm15957-201ENSMUST00000118893 974 ntBASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Gm45453-201ENSMUST00000211758 853 ntBASIC15.72■□□□□ 0.11
Rpap2Q8VC34 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpap2Q8VC34 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpap2Q8VC34 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms