Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Gm44492-201ENSMUST00000197012 141 ntBASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Vps39Q8R5L3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Gm15483-201ENSMUST00000120338 456 ntBASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Gm11543-201ENSMUST00000120758 370 ntBASIC14.36□□□□□ -0.11
Vps39Q8R5L3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps39Q8R5L3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Gm15427-201ENSMUST00000117288 531 ntBASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Gm17271-201ENSMUST00000165535 355 ntBASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Rpph1-201ENSMUST00000175096 319 ntBASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms