Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Gm13829-201ENSMUST00000119600 138 ntBASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Gm28911-201ENSMUST00000188837 117 ntBASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp7Q8R1T1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp7Q8R1T1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp7Q8R1T1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp7Q8R1T1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp7Q8R1T1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp7Q8R1T1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Gm15824-201ENSMUST00000119516 955 ntBASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp7Q8R1T1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Gm15678-201ENSMUST00000117573 960 ntBASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Gm37714-201ENSMUST00000194742 342 ntBASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Gm18062-201ENSMUST00000208020 547 ntBASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Gm18055-201ENSMUST00000208254 547 ntBASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp7Q8R1T1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Mir7654-201ENSMUST00000185082 70 ntBASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Gm44719-201ENSMUST00000206404 149 ntBASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Gm44608-201ENSMUST00000206827 855 ntBASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms