Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CroccQ8CJ40 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CroccQ8CJ40 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CroccQ8CJ40 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.72□□□□□ -0.21
CroccQ8CJ40 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CroccQ8CJ40 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CroccQ8CJ40 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CroccQ8CJ40 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CroccQ8CJ40 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CroccQ8CJ40 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CroccQ8CJ40 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.71□□□□□ -0.21
CroccQ8CJ40 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.71□□□□□ -0.21
CroccQ8CJ40 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.71□□□□□ -0.21
CroccQ8CJ40 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CroccQ8CJ40 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CroccQ8CJ40 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.71□□□□□ -0.22
CroccQ8CJ40 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CroccQ8CJ40 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CroccQ8CJ40 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.7□□□□□ -0.22
CroccQ8CJ40 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.7□□□□□ -0.22
CroccQ8CJ40 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CroccQ8CJ40 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CroccQ8CJ40 Gm23935-201ENSMUST00000102303 57 ntBASIC13.69□□□□□ -0.22
CroccQ8CJ40 Gm24270-201ENSMUST00000102326 57 ntBASIC13.69□□□□□ -0.22
CroccQ8CJ40 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CroccQ8CJ40 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.69□□□□□ -0.22
CroccQ8CJ40 Gm12428-201ENSMUST00000119844 727 ntBASIC13.69□□□□□ -0.22
CroccQ8CJ40 Gm15693-201ENSMUST00000120470 637 ntBASIC13.69□□□□□ -0.22
CroccQ8CJ40 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.69□□□□□ -0.22
CroccQ8CJ40 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.69□□□□□ -0.22
CroccQ8CJ40 Gm24245-201ENSMUST00000157318 57 ntBASIC13.69□□□□□ -0.22
CroccQ8CJ40 Gm9719-201ENSMUST00000162765 543 ntBASIC13.69□□□□□ -0.22
CroccQ8CJ40 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.69□□□□□ -0.22
CroccQ8CJ40 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CroccQ8CJ40 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CroccQ8CJ40 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CroccQ8CJ40 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CroccQ8CJ40 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms