Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Gm20949-201ENSMUST00000206478 952 ntBASIC14.66□□□□□ -0.06
CopaQ8CIE6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.66□□□□□ -0.06
CopaQ8CIE6 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.66□□□□□ -0.06
CopaQ8CIE6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CopaQ8CIE6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.65□□□□□ -0.06
CopaQ8CIE6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.65□□□□□ -0.06
CopaQ8CIE6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.65□□□□□ -0.06
CopaQ8CIE6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.65□□□□□ -0.06
CopaQ8CIE6 Gm2810-201ENSMUST00000118681 990 ntBASIC14.65□□□□□ -0.06
CopaQ8CIE6 Gm15483-201ENSMUST00000120338 456 ntBASIC14.65□□□□□ -0.06
CopaQ8CIE6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.65□□□□□ -0.06
CopaQ8CIE6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Celf4-206ENSMUST00000224553 1729 ntBASIC14.65□□□□□ -0.06
CopaQ8CIE6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.65□□□□□ -0.06
CopaQ8CIE6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CopaQ8CIE6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
CopaQ8CIE6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms