Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox30Q8CGW4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.64■□□□□ 0.09
Sox30Q8CGW4 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.64■□□□□ 0.09
Sox30Q8CGW4 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.64■□□□□ 0.09
Sox30Q8CGW4 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox30Q8CGW4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox30Q8CGW4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox30Q8CGW4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox30Q8CGW4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.64■□□□□ 0.09
Sox30Q8CGW4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sox30Q8CGW4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox30Q8CGW4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox30Q8CGW4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox30Q8CGW4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.63■□□□□ 0.09
Sox30Q8CGW4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox30Q8CGW4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Gm6973-201ENSMUST00000117080 721 ntBASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Gm28659-201ENSMUST00000188013 759 ntBASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox30Q8CGW4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox30Q8CGW4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms