Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Gm2651-201ENSMUST00000203560 838 ntBASIC17.71■□□□□ 0.43
Smc5Q8CG46 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.71■□□□□ 0.43
Smc5Q8CG46 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc5Q8CG46 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Smc5Q8CG46 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Smc5Q8CG46 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.71■□□□□ 0.42
Smc5Q8CG46 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Gm14140-201ENSMUST00000119999 995 ntBASIC17.7■□□□□ 0.42
Smc5Q8CG46 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smc5Q8CG46 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.69■□□□□ 0.42
Smc5Q8CG46 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.69■□□□□ 0.42
Smc5Q8CG46 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.69■□□□□ 0.42
Smc5Q8CG46 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smc5Q8CG46 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Smc5Q8CG46 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Gm12882-201ENSMUST00000121696 517 ntBASIC17.68■□□□□ 0.42
Smc5Q8CG46 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Smc5Q8CG46 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.68■□□□□ 0.42
Smc5Q8CG46 Gm20553-201ENSMUST00000204205 844 ntBASIC17.68■□□□□ 0.42
Smc5Q8CG46 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.68■□□□□ 0.42
Smc5Q8CG46 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.68■□□□□ 0.42
Smc5Q8CG46 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smc5Q8CG46 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms