Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Gm9182-201ENSMUST00000217829 639 ntBASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd4Q8CC84 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Gm7230-201ENSMUST00000173026 815 ntBASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Gm2272-201ENSMUST00000194903 582 ntBASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Gm6376-201ENSMUST00000209407 580 ntBASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms