Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Gm14723-201ENSMUST00000118686 215 ntBASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Gm10275-202ENSMUST00000168697 495 ntBASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Gm10275-201ENSMUST00000092620 635 ntBASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a6Q8C6K9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Gm9726-201ENSMUST00000180321 678 ntBASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Gm18905-201ENSMUST00000205454 928 ntBASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.87□□□□□ -0.35
Col6a6Q8C6K9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms