Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Gm25144-201ENSMUST00000179561 110 ntBASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Gm25352-201ENSMUST00000179815 110 ntBASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Gm27430-201ENSMUST00000184585 107 ntBASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Gm44333-201ENSMUST00000197168 107 ntBASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp44Q8C2S0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp44Q8C2S0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Usp44Q8C2S0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Usp44Q8C2S0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Mir1897-201ENSMUST00000122581 272 ntBASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp44Q8C2S0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Gm8584-201ENSMUST00000171982 758 ntBASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp44Q8C2S0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Gm8410-201ENSMUST00000117225 605 ntBASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Gm13223-201ENSMUST00000118609 747 ntBASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms