Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.03□□□□□ -0.48
Smim4Q8C1Q6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim4Q8C1Q6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim4Q8C1Q6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Smim4Q8C1Q6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim4Q8C1Q6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Smim4Q8C1Q6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim4Q8C1Q6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim4Q8C1Q6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim4Q8C1Q6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Smim4Q8C1Q6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim4Q8C1Q6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim4Q8C1Q6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Gm16198-201ENSMUST00000118766 670 ntBASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Gm13597-201ENSMUST00000121239 375 ntBASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Gm45098-201ENSMUST00000207179 657 ntBASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Smim4Q8C1Q6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms