Protein–RNA interactions for Protein: Q8C0S4

Ttc21a, Tetratricopeptide repeat protein 21A, mousemouse

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc21aQ8C0S4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Gm4875-201ENSMUST00000118257 786 ntBASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Gm33320-201ENSMUST00000192232 530 ntBASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc21aQ8C0S4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Gm15460-201ENSMUST00000118147 391 ntBASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc21aQ8C0S4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Gm15487-201ENSMUST00000122373 465 ntBASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Gm37714-201ENSMUST00000194742 342 ntBASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ttc21aQ8C0S4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC18.15■□□□□ 0.5
Ttc21aQ8C0S4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ttc21aQ8C0S4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ttc21aQ8C0S4 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.14■□□□□ 0.49
Ttc21aQ8C0S4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc21aQ8C0S4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc21aQ8C0S4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms