Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco3Q8BQM7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Gm8097-201ENSMUST00000117903 829 ntBASIC11.79□□□□□ -0.52
Smco3Q8BQM7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco3Q8BQM7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms