Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr3Q8BL00 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr3Q8BL00 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr3Q8BL00 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr3Q8BL00 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr3Q8BL00 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Gm13884-201ENSMUST00000118103 829 ntBASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdhr3Q8BL00 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdhr3Q8BL00 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdhr3Q8BL00 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdhr3Q8BL00 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Cdhr3Q8BL00 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cdhr3Q8BL00 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdhr3Q8BL00 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Gm45098-201ENSMUST00000207179 657 ntBASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cdhr3Q8BL00 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Gm8584-201ENSMUST00000171982 758 ntBASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Mir5131-201ENSMUST00000175426 93 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms