Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Mir5126-201ENSMUST00000175513 77 ntBASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp2bQ8BJF9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp2bQ8BJF9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.71□□□□□ -0.06
Chmp2bQ8BJF9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp2bQ8BJF9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp2bQ8BJF9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp2bQ8BJF9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Gm10154-201ENSMUST00000084445 354 ntBASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp2bQ8BJF9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Gm16198-201ENSMUST00000118766 670 ntBASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp2bQ8BJF9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Gm14042-201ENSMUST00000120139 833 ntBASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms