Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nrde2Q80XC6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nrde2Q80XC6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nrde2Q80XC6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nrde2Q80XC6 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.6□□□□□ -0.07
Nrde2Q80XC6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nrde2Q80XC6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nrde2Q80XC6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.6□□□□□ -0.07
Nrde2Q80XC6 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.6□□□□□ -0.07
Nrde2Q80XC6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Nrde2Q80XC6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nrde2Q80XC6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Gm23984-201ENSMUST00000157139 203 ntBASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Gm5479-201ENSMUST00000160578 435 ntBASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Gm20445-201ENSMUST00000061905 565 ntBASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nrde2Q80XC6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nrde2Q80XC6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nrde2Q80XC6 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.58□□□□□ -0.07
Nrde2Q80XC6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Nrde2Q80XC6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Nrde2Q80XC6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nrde2Q80XC6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Nrde2Q80XC6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Gm15653-201ENSMUST00000119247 907 ntBASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Nrde2Q80XC6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Gm29667-201ENSMUST00000190817 490 ntBASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nrde2Q80XC6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms