Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Efs-202ENSMUST00000227037 2540 ntBASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Gm15487-201ENSMUST00000122373 465 ntBASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh19Q80TF3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Gm7730-201ENSMUST00000212486 454 ntBASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh19Q80TF3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms