Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Gm27533-201ENSMUST00000183800 152 ntBASIC15.03■□□□□ -0
Prpf38bQ80SY5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Gm45841-201ENSMUST00000207700 164 ntBASIC15.03■□□□□ -0
Prpf38bQ80SY5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38bQ80SY5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf38bQ80SY5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Prpf38bQ80SY5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.02■□□□□ -0
Prpf38bQ80SY5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf38bQ80SY5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf38bQ80SY5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf38bQ80SY5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf38bQ80SY5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf38bQ80SY5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Prpf38bQ80SY5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf38bQ80SY5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.02■□□□□ -0
Prpf38bQ80SY5 Gm45331-201ENSMUST00000209868 554 ntBASIC15.02■□□□□ -0
Prpf38bQ80SY5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf38bQ80SY5 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.02■□□□□ -0
Prpf38bQ80SY5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf38bQ80SY5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf38bQ80SY5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Prpf38bQ80SY5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Prpf38bQ80SY5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.02□□□□□ -0.01
Prpf38bQ80SY5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf38bQ80SY5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf38bQ80SY5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf38bQ80SY5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf38bQ80SY5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf38bQ80SY5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf38bQ80SY5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf38bQ80SY5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf38bQ80SY5 Gm15806-201ENSMUST00000120696 955 ntBASIC15□□□□□ -0.01
Prpf38bQ80SY5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Prpf38bQ80SY5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms