Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.97□□□□□ -0.17
Scn4bQ7M729 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Gm14822-201ENSMUST00000122247 291 ntBASIC13.97□□□□□ -0.17
Scn4bQ7M729 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Gm6736-201ENSMUST00000166583 948 ntBASIC13.97□□□□□ -0.17
Scn4bQ7M729 Gm18737-201ENSMUST00000173594 937 ntBASIC13.97□□□□□ -0.17
Scn4bQ7M729 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn4bQ7M729 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.96□□□□□ -0.17
Scn4bQ7M729 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Gm2810-201ENSMUST00000118681 990 ntBASIC13.96□□□□□ -0.17
Scn4bQ7M729 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Rprl2-201ENSMUST00000157150 290 ntBASIC13.96□□□□□ -0.17
Scn4bQ7M729 Gm10275-202ENSMUST00000168697 495 ntBASIC13.96□□□□□ -0.17
Scn4bQ7M729 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.96□□□□□ -0.17
Scn4bQ7M729 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.96□□□□□ -0.17
Scn4bQ7M729 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.96□□□□□ -0.17
Scn4bQ7M729 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Gm10275-201ENSMUST00000092620 635 ntBASIC13.96□□□□□ -0.17
Scn4bQ7M729 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn4bQ7M729 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn4bQ7M729 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.96□□□□□ -0.18
Scn4bQ7M729 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.95□□□□□ -0.18
Scn4bQ7M729 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Gm27702-201ENSMUST00000184512 56 ntBASIC13.95□□□□□ -0.18
Scn4bQ7M729 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.95□□□□□ -0.18
Scn4bQ7M729 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn4bQ7M729 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms