Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Gm16026-204ENSMUST00000162652 683 ntBASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Gm2272-201ENSMUST00000194903 582 ntBASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Acot6-202ENSMUST00000222921 3622 ntBASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Gm28033-201ENSMUST00000184224 96 ntBASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Rps4l-201ENSMUST00000071745 943 ntBASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.14□□□□□ -0.15
Scaf4Q6PFF0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Ank2-226ENSMUST00000189368 339 ntBASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Gm7977-201ENSMUST00000193787 748 ntBASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scaf4Q6PFF0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms