Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.54□□□□□ -0.08
Casc4Q6P2L7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casc4Q6P2L7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casc4Q6P2L7 Gm22065-201ENSMUST00000103753 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm22066-201ENSMUST00000103761 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm24932-201ENSMUST00000103763 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm24115-201ENSMUST00000103799 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm22190-201ENSMUST00000103827 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm22191-201ENSMUST00000103831 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm24721-201ENSMUST00000103849 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm28018-201ENSMUST00000103869 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm26399-201ENSMUST00000103937 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm24158-201ENSMUST00000175263 71 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm25349-201ENSMUST00000177728 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm23616-201ENSMUST00000177797 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm25871-201ENSMUST00000177816 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm24752-201ENSMUST00000178240 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm24496-201ENSMUST00000178287 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm25649-201ENSMUST00000178476 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm25548-201ENSMUST00000178681 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm23147-201ENSMUST00000178841 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm26095-201ENSMUST00000179270 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm22171-201ENSMUST00000179283 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm23936-201ENSMUST00000179354 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm22619-201ENSMUST00000179516 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm25255-201ENSMUST00000179579 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm24755-201ENSMUST00000179691 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm26506-201ENSMUST00000179692 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm25086-201ENSMUST00000179931 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm23243-201ENSMUST00000180047 110 ntBASIC14.52□□□□□ -0.09
Casc4Q6P2L7 Gm24659-201ENSMUST00000180212 110 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms