Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Scube3Q66PY1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scube3Q66PY1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scube3Q66PY1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Scube3Q66PY1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.08■□□□□ 0.01
Scube3Q66PY1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scube3Q66PY1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scube3Q66PY1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scube3Q66PY1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scube3Q66PY1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.08■□□□□ 0
Scube3Q66PY1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Scube3Q66PY1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Scube3Q66PY1 Gm24543-201ENSMUST00000103867 82 ntBASIC15.08■□□□□ 0
Scube3Q66PY1 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.08■□□□□ 0
Scube3Q66PY1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Gm17837-201ENSMUST00000186435 985 ntBASIC15.08■□□□□ 0
Scube3Q66PY1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.08■□□□□ 0
Scube3Q66PY1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Scube3Q66PY1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Scube3Q66PY1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.08■□□□□ 0
Scube3Q66PY1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC15.08■□□□□ 0
Scube3Q66PY1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.08■□□□□ 0
Scube3Q66PY1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.08■□□□□ 0
Scube3Q66PY1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scube3Q66PY1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.07■□□□□ 0
Scube3Q66PY1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.07■□□□□ 0
Scube3Q66PY1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Gm13223-201ENSMUST00000118609 747 ntBASIC15.07■□□□□ 0
Scube3Q66PY1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Gm27533-201ENSMUST00000183800 152 ntBASIC15.07■□□□□ 0
Scube3Q66PY1 Gm27321-201ENSMUST00000185021 205 ntBASIC15.07■□□□□ 0
Scube3Q66PY1 Gm45453-201ENSMUST00000211758 853 ntBASIC15.07■□□□□ 0
Scube3Q66PY1 Shd-206ENSMUST00000225145 998 ntBASIC15.07■□□□□ 0
Scube3Q66PY1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Scube3Q66PY1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Scube3Q66PY1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.06■□□□□ 0
Scube3Q66PY1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Scube3Q66PY1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Gm25144-201ENSMUST00000179561 110 ntBASIC15.06■□□□□ 0
Scube3Q66PY1 Gm25352-201ENSMUST00000179815 110 ntBASIC15.06■□□□□ 0
Scube3Q66PY1 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.06■□□□□ 0
Scube3Q66PY1 Gm6888-201ENSMUST00000221983 706 ntBASIC15.06■□□□□ 0
Scube3Q66PY1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms