Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Gm27618-201ENSMUST00000183671 60 ntBASIC13.81□□□□□ -0.2
Sdc3Q64519 Gm17837-201ENSMUST00000186435 985 ntBASIC13.81□□□□□ -0.2
Sdc3Q64519 Gm18766-201ENSMUST00000189811 808 ntBASIC13.81□□□□□ -0.2
Sdc3Q64519 Gm45098-201ENSMUST00000207179 657 ntBASIC13.81□□□□□ -0.2
Sdc3Q64519 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.81□□□□□ -0.2
Sdc3Q64519 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.81□□□□□ -0.2
Sdc3Q64519 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.81□□□□□ -0.2
Sdc3Q64519 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sdc3Q64519 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.8□□□□□ -0.2
Sdc3Q64519 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
Sdc3Q64519 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Sdc3Q64519 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Gm9726-201ENSMUST00000180321 678 ntBASIC13.8□□□□□ -0.2
Sdc3Q64519 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sdc3Q64519 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.8□□□□□ -0.2
Sdc3Q64519 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.8□□□□□ -0.2
Sdc3Q64519 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sdc3Q64519 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sdc3Q64519 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sdc3Q64519 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc3Q64519 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sdc3Q64519 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.79□□□□□ -0.2
Sdc3Q64519 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sdc3Q64519 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 Gm13223-201ENSMUST00000118609 747 ntBASIC13.79□□□□□ -0.2
Sdc3Q64519 Gm14057-201ENSMUST00000120631 482 ntBASIC13.79□□□□□ -0.2
Sdc3Q64519 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Sdc3Q64519 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.79□□□□□ -0.2
Sdc3Q64519 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.79□□□□□ -0.2
Sdc3Q64519 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.79□□□□□ -0.2
Sdc3Q64519 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Sdc3Q64519 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sdc3Q64519 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sdc3Q64519 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sdc3Q64519 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sdc3Q64519 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms