Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccne1Q61457 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.55■□□□□ 0.56
Ccne1Q61457 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.55■□□□□ 0.56
Ccne1Q61457 Gm44608-201ENSMUST00000206827 855 ntBASIC18.55■□□□□ 0.56
Ccne1Q61457 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccne1Q61457 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Ccne1Q61457 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccne1Q61457 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccne1Q61457 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ccne1Q61457 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Ccne1Q61457 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ccne1Q61457 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.55■□□□□ 0.56
Ccne1Q61457 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Ccne1Q61457 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ccne1Q61457 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.54■□□□□ 0.56
Ccne1Q61457 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccne1Q61457 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Ccne1Q61457 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ccne1Q61457 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ccne1Q61457 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Ccne1Q61457 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.54■□□□□ 0.56
Ccne1Q61457 Gm5425-201ENSMUST00000214125 459 ntBASIC18.54■□□□□ 0.56
Ccne1Q61457 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ccne1Q61457 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccne1Q61457 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.54■□□□□ 0.56
Ccne1Q61457 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccne1Q61457 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccne1Q61457 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.53■□□□□ 0.56
Ccne1Q61457 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.53■□□□□ 0.56
Ccne1Q61457 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC18.53■□□□□ 0.56
Ccne1Q61457 Gm18027-201ENSMUST00000218947 619 ntBASIC18.53■□□□□ 0.56
Ccne1Q61457 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.53■□□□□ 0.56
Ccne1Q61457 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ccne1Q61457 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ccne1Q61457 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Ccne1Q61457 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ccne1Q61457 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccne1Q61457 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ccne1Q61457 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccne1Q61457 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ccne1Q61457 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccne1Q61457 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ccne1Q61457 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccne1Q61457 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccne1Q61457 Gm11425-201ENSMUST00000119608 498 ntBASIC18.52■□□□□ 0.56
Ccne1Q61457 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccne1Q61457 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccne1Q61457 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms